STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03902.1DAK1 domain protein; KEGG: ctc:CTC01762 1.9e-59 dihydroxyacetone kinase K05878; COG: COG2376 Dihydroxyacetone kinase; Psort location: Cytoplasmic, score: 8.96. (335 aa)    
Predicted Functional Partners:
EDV03901.1
DAK2 domain protein; KEGG: msm:MSMEG_2122 8.4e-25 dihydroxyacetone kinase, L subunit K00924; COG: COG2376 Dihydroxyacetone kinase.
  
  0.999
EDV03903.1
Hypothetical protein; KEGG: ana:alr2321 0.00019 lactoylglutathione lyase K01759.
 
     0.882
LsrF
KEGG: hso:HS_0055 1.2e-98 conserved aldolase K08321; COG: COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
 
     0.876
EDV07498.1
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein; KEGG: bfr:BF3811 6.6e-167 glycerol-3-phosphate dehydrogenase K00057; COG: COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.823
EDV03904.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
 
     0.780
EDV03899.1
Hypothetical protein; COG: NOG38781 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.752
EDV03898.1
Hypothetical protein; KEGG: ava:Ava_5054 6.5e-19 serine/threonine protein kinase K00908; COG: NOG18209 non supervised orthologous group; Psort location: Periplasmic, score: 9.84.
 
     0.722
EDV03905.1
Hypothetical protein; COG: NOG08094 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
    0.710
EDV03906.1
Hypothetical protein; KEGG: nph:NP4384A 8.7e-06 cpx; cytochrome-c peroxidase (CytC-type peroxidase) K00428; COG: COG1858 Cytochrome c peroxidase.
 
     0.650
ccsB
Cytochrome c-type biogenesis protein CcsB; KEGG: sat:SYN_00150 9.8e-33 heme export protein apocytochrome heme-lyase; COG: COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.483
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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