STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepDXaa-His dipeptidase; KEGG: bth:BT1615 8.1e-217 aminoacyl-histidine dipeptidase K01270; COG: COG2195 Di- and tripeptidases; Psort location: Cytoplasmic, score: 8.96. (486 aa)    
Predicted Functional Partners:
pepD-2
Xaa-His dipeptidase; KEGG: bth:BT4045 3.8e-210 aminoacyl-histidine dipeptidase K01270; COG: COG2195 Di- and tripeptidases.
  
  
 
0.905
EDV04209.1
Aminotransferase, class I/II; KEGG: bfs:BF1601 6.9e-204 putative aspartate aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 
  0.847
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.842
EDV06931.1
Aminotransferase, class I/II; KEGG: bfr:BF0595 6.5e-192 aspartate aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
  0.818
cysK
Cysteine synthase A; KEGG: bfs:BF4362 5.6e-138 cysK; putative cysteine synthase K01738; COG: COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.815
cysK-2
Cysteine synthase A; KEGG: bth:BT1852 4.7e-141 cysteine synthase A K01738; COG: COG0031 Cysteine synthase; Psort location: Cytoplasmic, score: 8.96; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.815
EDV05272.1
Aminotransferase, class I/II; KEGG: bth:BT4138 2.5e-158 putative aminotransferase K00842; COG: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; Psort location: Cytoplasmic, score: 8.96.
    
 0.807
EDV03920.1
Hypothetical protein; COG: NOG35566 non supervised orthologous group.
       0.664
EDV03957.1
Endonuclease/exonuclease/phosphatase family protein; COG: NOG08645 non supervised orthologous group.
 
     0.579
EDV06658.1
Peptidase, M24 family; KEGG: bfs:BF4027 5.0e-240 putative peptidase K01262; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.508
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.