STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03972.1Hypothetical protein; COG: NOG25237 non supervised orthologous group. (422 aa)    
Predicted Functional Partners:
EDV03906.1
Hypothetical protein; KEGG: nph:NP4384A 8.7e-06 cpx; cytochrome-c peroxidase (CytC-type peroxidase) K00428; COG: COG1858 Cytochrome c peroxidase.
 
 
 0.854
EDV03971.1
Hypothetical protein.
       0.795
EDV04464.1
Hypothetical protein.
 
 
 
 0.773
EDV07560.1
SusD family protein; Psort location: OuterMembrane, score: 9.49.
 
 
   0.766
EDV03904.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
  
     0.765
EDV06026.1
Hypothetical protein.
  
     0.764
EDV03905.1
Hypothetical protein; COG: NOG08094 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.744
EDV03898.1
Hypothetical protein; KEGG: ava:Ava_5054 6.5e-19 serine/threonine protein kinase K00908; COG: NOG18209 non supervised orthologous group; Psort location: Periplasmic, score: 9.84.
  
     0.735
EDV03899.1
Hypothetical protein; COG: NOG38781 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.733
EDV06459.1
SusD family protein.
 
 
   0.721
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.