STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04093.1Alpha-L-fucosidase; KEGG: bfr:BF3420 1.3e-200 alpha-L-fucosidase precursor K01206; COG: COG3669 Alpha-L-fucosidase. (436 aa)    
Predicted Functional Partners:
EDV04095.1
Transcriptional regulator, Fur family; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score: 9.26; Belongs to the Fur family.
       0.709
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.672
EDV04092.1
Putative neutral zinc metallopeptidase; COG: COG2738 Predicted Zn-dependent protease; Psort location: CytoplasmicMembrane, score: 9.46.
       0.534
EDV06472.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: rba:RB700 3.1e-96 ramA; alfa-L-rhamnosidase; COG: NOG04002 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
   
 0.528
EDV05892.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: rba:RB700 4.2e-144 ramA; alfa-L-rhamnosidase; COG: NOG04002 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
   
 0.477
EDV06463.1
Alpha-L-rhamnosidase N-terminal domain protein; KEGG: rba:RB700 7.9e-116 ramA; alfa-L-rhamnosidase; COG: NOG04002 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
   
 0.471
EDV04096.1
Hypothetical protein; KEGG: pgi:PG0317 3.6e-18 peptidase, M49 family K01277; COG: NOG25957 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
       0.404
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.