STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04097.1Peptidase family M49; KEGG: bfs:BF3247 0. putative membrane attached peptidase K01277; COG: NOG06018 non supervised orthologous group. (681 aa)    
Predicted Functional Partners:
EDV04096.1
Hypothetical protein; KEGG: pgi:PG0317 3.6e-18 peptidase, M49 family K01277; COG: NOG25957 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.858
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.715
EDV04098.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.6e-07 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: NOG18165 non supervised orthologous group.
       0.703
EDV04095.1
Transcriptional regulator, Fur family; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score: 9.26; Belongs to the Fur family.
     
 0.693
EDV04207.1
Glycosyltransferase, group 2 family protein; KEGG: chu:CHU_2182 9.6e-10 ycdQ; b-glycosyltransferase-related protein, glycosyltransferase family 2 protein K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: CytoplasmicMembrane, score: 9.46.
 
 
 0.643
recQ-2
KEGG: bth:BT1848 3.4e-266 recQ; ATP-dependent DNA helicase recQ K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score: 8.96.
   
   0.634
EDV03271.1
Hypothetical protein; COG: NOG14434 non supervised orthologous group.
 
  0.602
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
 
 0.580
HtpG
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eci:UTI89_C0501 8.6e-71 htpG; chaperone HSP90, heat shock protein C 62.5 K04079; COG: COG0326 Molecular chaperone, HSP90 family; Psort location: Cytoplasmic, score: 9.26.
  
 0.577
EDV07358.1
Putative Replication protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.562
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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