STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04237.1Hypothetical protein; KEGG: lsl:LSL_1673 2.1e-12 wecD; acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score: 8.96. (163 aa)    
Predicted Functional Partners:
EDV04236.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 5.6e-19 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 9.97.
 
     0.627
NudC
Hydrolase, NUDIX family; KEGG: bth:BT1544 2.3e-84 NADH pyrophosphatase, MutT family hydrolase K03659; COG: COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; Belongs to the Nudix hydrolase family.
       0.568
EDV04234.1
Histidine kinase; KEGG: chu:CHU_2576 2.2e-14 cheA; two-component sensor histidine kinase; COG: COG3275 Putative regulator of cell autolysis; Psort location: CytoplasmicMembrane, score: 9.46.
       0.563
EDV04235.1
Histidine kinase; KEGG: chu:CHU_2576 1.5e-25 cheA; two-component sensor histidine kinase; COG: COG3275 Putative regulator of cell autolysis; Psort location: CytoplasmicMembrane, score: 10.00.
       0.563
EDV04233.1
Hypothetical protein; COG: NOG17212 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
       0.433
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.