STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04242.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EDV04241.1
Peptidase, M23 family; KEGG: hpa:HPAG1_1492 5.0e-05 ToxR-activated gene K01463; COG: COG0739 Membrane proteins related to metalloendopeptidases.
       0.561
ald
Alanine dehydrogenase; KEGG: bfs:BF1406 1.3e-163 ald; putative alanine dehydrogenase K00259; COG: COG0686 Alanine dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the AlaDH/PNT family.
       0.453
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.