STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04251.1Ion channel; COG: NOG18217 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00. (242 aa)    
Predicted Functional Partners:
EDV04253.1
Hypothetical protein; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.752
EDV04252.1
Putative glutamate/gamma-aminobutyrate antiporter; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.746
EDV04248.1
Transporter, major facilitator family protein; KEGG: sgl:SG1466 0.0024 dethiobiotin synthase K01935; COG: NOG16836 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.735
EDV04465.1
Hypothetical protein; COG: NOG10142 non supervised orthologous group.
  
    0.717
EDV03225.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score: 9.93.
  
    0.610
EDV04703.1
Cation transport protein; KEGG: shn:Shewana3_0031 4.2e-05 potassium uptake protein, TrkH family K00961; COG: COG0168 Trk-type K+ transport systems, membrane components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.609
EDV06998.1
Hypothetical protein; COG: NOG26965 non supervised orthologous group.
  
     0.601
EDV03037.1
Arylsulfatase; KEGG: pha:PSHAa2772 4.2e-28 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.557
EDV05323.1
KEGG: shn:Shewana3_0031 3.3e-78 potassium uptake protein, TrkH family K00961; COG: COG0168 Trk-type K+ transport systems, membrane components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.534
EDV03038.1
Hypothetical protein; COG: NOG06295 non supervised orthologous group.
 
     0.521
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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