Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDV04278.1Hypothetical protein; KEGG: bfs:BF1254 9.4e-41 exc; putative transposon excision protein K03169; COG: COG0550 Topoisomerase IA. (123 aa)    
Predicted Functional Partners:
EDV04280.1
KEGG: bth:BT0105 5.2e-174 DNA topoisomerase I (Omega-protein) K03169; COG: COG0550 Topoisomerase IA.
 
     0.892
EDV06637.1
Hypothetical protein; KEGG: lic:LIC12689 6.5e-34 ATP-dependent DNA helicase K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score: 8.96.
  
 0.737
EDV04276.1
Hypothetical protein; COG: NOG09947 non supervised orthologous group.
 
 
 
 0.694
EDV07398.1
Hypothetical protein; KEGG: mta:Moth_0349 2.2e-24 DNA topoisomerase K01862; COG: COG0550 Topoisomerase IA; Psort location: Cytoplasmic, score: 8.96.
  
     0.692
EDV03150.1
HRDC domain protein; KEGG: pmm:PMM1102 7.6e-07 recD; possible exodeoxyribonuclease V 67 kD polypeptide K03581; COG: COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; Psort location: Cytoplasmic, score: 8.96.
  
 0.604
EDV04277.1
Hypothetical protein.
       0.594
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.96.
  
   0.574
EDV04274.1
DNA binding domain, excisionase family; COG: NOG35229 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.489
EDV04275.1
Hypothetical protein; COG: NOG30592 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.468
EDV03328.1
KEGG: eci:UTI89_C0417 6.9e-81 sbcC; exonuclease SbcC K03546; COG: COG0419 ATPase involved in DNA repair; Psort location: Cytoplasmic, score: 8.96.
  
 0.403
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.