STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04291.1Hypothetical protein; KEGG: rba:RB11118 1.3e-115 chloromuconate cycloisomerase YkfB1 K01860; COG: COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. (388 aa)    
Predicted Functional Partners:
EDV04292.1
Hypothetical protein; KEGG: rba:RB11119 8.1e-59 pipeptidyl-peptidase VI; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
 0.902
EDV04290.1
Hypothetical protein; COG: COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.861
EDV07180.1
Hypothetical protein; COG: COG4299 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.509
EDV07179.1
FAD binding domain protein; KEGG: rru:Rru_A1410 5.5e-211 4Fe-4S ferredoxin K00102; COG: COG0247 Fe-S oxidoreductase.
 
  
 0.498
EDV06432.1
Hypothetical protein; COG: COG4299 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.472
EDV04289.1
Hypothetical protein; KEGG: bth:BT1312 1.5e-194 serine protease precursor; COG: COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Psort location: Periplasmic, score: 9.76.
       0.404
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.