STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04327.1Hypothetical protein; COG: NOG26608 non supervised orthologous group. (282 aa)    
Predicted Functional Partners:
EDV04328.1
Hypothetical protein; KEGG: bcz:BCZK0531 1.5e-96 galE; NAD-dependent epimerase; possible UDP-glucose 4-epimerase K01784; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.96.
       0.809
murB
Putative UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.795
kbl
2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
       0.680
EDV04325.1
Putative hydrolase; KEGG: gbe:GbCGDNIH1_1079 4.3e-28 metal-dependent hydrolase; COG: COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; Psort location: Cytoplasmic, score: 8.96.
       0.652
EDV04324.1
Hypothetical protein; COG: NOG25407 non supervised orthologous group.
       0.566
pheS
phenylalanine--tRNA ligase, alpha subunit; KEGG: bth:BT1669 4.2e-172 phenylalanyl-tRNA synthetase alpha chain K01889; COG: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Psort location: Cytoplasmic, score: 10.00.
       0.429
EDV05438.1
Hypothetical protein; COG: NOG18174 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
       0.424
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.