STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04361.1Hypothetical protein; COG: COG5545 Predicted P-loop ATPase and inactivated derivatives. (695 aa)    
Predicted Functional Partners:
EDV04360.1
Hypothetical protein; COG: NOG23370 non supervised orthologous group.
       0.773
EDV04406.1
COG: COG3746 Phosphate-selective porin; Psort location: OuterMembrane, score: 9.52.
  
     0.687
EDV06737.1
Putative DNA-binding protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.679
EDV03285.1
Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.662
EDV05893.1
Acyltransferase; COG: COG3274 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.658
EDV04404.1
Endoribonuclease L-PSP; KEGG: ape:APE_1501.1 0.00015 ribonuclease UK114; COG: COG0251 Putative translation initiation inhibitor, yjgF family.
  
     0.642
EDV07190.1
Hypothetical protein; COG: NOG19130 non supervised orthologous group.
  
     0.631
EDV03082.1
Putative DNA-binding protein; COG: NOG34048 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
    0.628
EDV04436.1
Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.623
EDV03684.1
Putative glycosyl hydrolase family 10.
  
     0.592
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.