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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04496.1Hypothetical protein; KEGG: ctc:CTC00992 8.4e-20 magnesium-protoporphyrin IX monomethyl ester oxidative cyclase K04034; COG: COG1032 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.96. (287 aa)    
Predicted Functional Partners:
EDV04497.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.572
EDV06271.1
Polysaccharide lyase family 8, super-sandwich domain protein; Broad-specificity glycosaminoglycan lyase.
  
    0.533
EDV04495.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.531
EDV05046.1
Hypothetical protein; COG: NOG26882 non supervised orthologous group.
  
     0.487
EDV07780.1
Heparinase II/III-like protein; COG: NOG15911 non supervised orthologous group.
  
    0.474
EDV07783.1
Tat pathway signal sequence domain protein.
  
     0.459
EDV03423.1
KEGG: bfr:BF2023 2.5e-151 type II restriction enzyme HpaII K01155; COG: NOG26934 non supervised orthologous group.
 
    0.441
EDV04199.1
UvrD/REP helicase; KEGG: btk:BT9727_0961 5.1e-89 uvrD; ATP-dependent DNA helicase replicase K01529; COG: COG3973 Superfamily I DNA and RNA helicases.
  
     0.439
EDV04498.1
Putative DNA-binding protein; COG: NOG31286 non supervised orthologous group.
       0.430
EDV07631.1
OmpA family protein; KEGG: bps:BPSL0453 0.00015 putative cytochrome c oxidase K02275; COG: NOG23215 non supervised orthologous group; Psort location: OuterMembrane, score: 9.93.
  
     0.425
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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