STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04691.1Hypothetical protein; KEGG: lac:LBA1265 0.0013 cdsA; phosphatidate cytidylyltransferase K00981; COG: NOG23376 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46. (170 aa)    
Predicted Functional Partners:
EDV04692.1
TonB-dependent receptor; KEGG: shn:Shewana3_3063 2.8e-05 phosphatidylglycerophosphatase K01094; COG: COG4771 Outer membrane receptor for ferrienterochelin and colicins; Psort location: OuterMembrane, score: 10.00.
 
     0.863
EDV04690.1
4Fe-4S binding domain protein; KEGG: mmp:MMP1692 1.0e-18 vhuB; polyferredoxin, associated with F420-non-reducing hydrogenase; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.823
EDV06947.1
Hypothetical protein; COG: NOG31568 non supervised orthologous group.
  
     0.715
EDV04689.1
Tat pathway signal sequence domain protein; KEGG: mma:MM3156 2.0e-53 oxidoreductase; COG: COG1453 Predicted oxidoreductases of the aldo/keto reductase family.
 
     0.683
EDV07332.1
Hypothetical protein; COG: NOG18433 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.678
EDV03692.1
Hypothetical protein; KEGG: cal:orf19.4072 2.9e-09 HYR10; similar to cell surface flocculin K01186; COG: NOG39443 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
     0.636
EDV05196.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.572
EDV05373.1
Hypothetical protein; COG: NOG29298 non supervised orthologous group.
  
     0.571
EDV05031.1
Hypothetical protein; COG: NOG25960 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
     0.570
EDV02969.1
Transporter, major facilitator family protein; COG: COG3104 Dipeptide/tripeptide permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.569
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.