STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04892.1Hypothetical protein; COG: COG5464 Uncharacterized conserved protein. (323 aa)    
Predicted Functional Partners:
EDV05739.1
Hypothetical protein; COG: NOG08812 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
     0.733
PorU
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
 
  
 0.724
EDV04889.1
Hypothetical protein; COG: NOG08812 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.713
EDV06816.1
Hypothetical protein; COG: NOG25278 non supervised orthologous group.
  
     0.709
EDV04122.1
Hypothetical protein; COG: NOG25278 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.708
EDV04137.1
Hypothetical protein; COG: NOG25278 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.707
EDV04007.1
Hypothetical protein; KEGG: bcc:BCc_196 0.00069 aspS; AspS K01876; COG: NOG25278 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.703
EDV04138.1
Hypothetical protein; COG: NOG25278 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.702
EDV05687.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rba:RB10330 8.6e-46 sensory transduction histidine kinase-possibly sensor/response regulator hybrid; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.699
EDV04412.1
Hypothetical protein; COG: NOG08812 non supervised orthologous group.
  
     0.689
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.