STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04930.1COG: COG2832 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.46. (119 aa)    
Predicted Functional Partners:
QueD
Putative queuosine biosynthesis protein QueD; KEGG: bfs:BF3400 5.4e-46 putative 6-pyruvoyl tetrahydropterin synthase K01737; COG: COG0720 6-pyruvoyl-tetrahydropterin synthase; Psort location: Cytoplasmic, score: 8.96.
       0.618
queE
Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.598
EDV04929.1
Hypothetical protein; KEGG: mmu:27426 0.00021 Nagpa; N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase K01125; COG: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
       0.560
EDV04908.1
Hypothetical protein; COG: NOG16835 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.432
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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