STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04967.1Hypothetical protein; COG: NOG25792 non supervised orthologous group. (353 aa)    
Predicted Functional Partners:
EDV05040.1
Hypothetical protein; KEGG: cpf:CPF_1523 0.0023 sensory box histidine kinase; COG: NOG14470 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.768
EDV06444.1
Tetratricopeptide repeat protein; KEGG: rba:RB12434 0.00036 ogt; O-GlcNAc transferase K00754; COG: NOG06405 non supervised orthologous group.
  
     0.766
EDV07698.1
Hypothetical protein; KEGG: neu:NE0882 0.00037 surA; PpiC-type peptidyl-prolyl cis-trans isomerase K03771; COG: NOG11650 non supervised orthologous group.
  
     0.764
EDV04780.1
Tetratricopeptide repeat protein; COG: NOG11656 non supervised orthologous group.
  
     0.763
EDV05188.1
Hypothetical protein; COG: NOG19149 non supervised orthologous group.
  
     0.758
EDV07308.1
Hypothetical protein; COG: NOG19127 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.751
EDV05447.1
Hypothetical protein; COG: NOG19105 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.748
EDV03671.1
Hypothetical protein; COG: NOG07963 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
     0.744
EDV05929.1
Hypothetical protein; KEGG: pcu:pc0570 0.0048 nuoL, nuo12; putative NADH-ubiquinone oxidoreductase chain L K00341; COG: NOG26779 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.743
EDV03340.1
Hypothetical protein; COG: NOG33517 non supervised orthologous group.
  
     0.742
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.