STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05010.1COG: COG1538 Outer membrane protein. (225 aa)    
Predicted Functional Partners:
EDV05011.1
Auxiliary transport protein, membrane fusion protein (MFP) family protein; COG: COG1566 Multidrug resistance efflux pump.
 
 
 0.940
EDV05012.1
Transporter, major facilitator family protein; COG: NOG26849 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.923
EDV05009.1
Transcriptional regulator, MarR family; COG: COG1846 Transcriptional regulators.
  
  
 0.853
EDV04492.1
Auxiliary transport protein, membrane fusion protein (MFP) family protein; COG: COG1566 Multidrug resistance efflux pump; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.829
EDV05443.1
Auxiliary transport protein, membrane fusion protein (MFP) family protein; COG: COG1566 Multidrug resistance efflux pump.
 
 
 0.827
EDV05442.1
Hypothetical protein; KEGG: lpf:lpl2307 0.0075 probable cation-transporting ATPase K01529; COG: NOG26849 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.746
EDV04491.1
Hypothetical protein; COG: NOG26849 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.732
EDV03482.1
Hypothetical protein; COG: NOG27057 non supervised orthologous group.
  
 
 0.577
EDV02910.1
Acyltransferase; KEGG: bja:bll4688 1.4e-24 putative acetyltransferase K00680; COG: COG1835 Predicted acyltransferases; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.553
EDV04246.1
Auxiliary transport protein, membrane fusion protein (MFP) family protein; COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.517
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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