STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05280.1Tetratricopeptide repeat protein; KEGG: bsu:BG11965 0.00019 rapB, spo0P, ywmE; response regulator aspartate phosphatase K06360; COG: NOG23370 non supervised orthologous group. (559 aa)    
Predicted Functional Partners:
EDV05281.1
BNR/Asp-box repeat protein; KEGG: bth:BT0455 7.5e-230 sialidase (neuraminidase) K01186; COG: COG4409 Neuraminidase (sialidase).
     
 0.598
EDV05282.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.592
EDV03973.1
Tetratricopeptide repeat protein; COG: NOG25320 non supervised orthologous group.
 
     0.492
EDV03972.1
Hypothetical protein; COG: NOG25237 non supervised orthologous group.
 
 
   0.490
EDV05279.1
Hypothetical protein; COG: NOG32893 non supervised orthologous group.
       0.476
EDV06939.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.468
EDV06940.1
Hypothetical protein.
 
 
   0.460
EDV04464.1
Hypothetical protein.
  
     0.459
EDV07769.1
Hypothetical protein; KEGG: eci:UTI89_C2351 4.0e-33 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.447
EDV03904.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
  
     0.417
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.