STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05287.1Transporter, major facilitator family protein; KEGG: cal:orf19.4384 0.0015 HXT10; fructose symporter K01804; COG: COG0738 Fucose permease; Psort location: CytoplasmicMembrane, score: 10.00. (381 aa)    
Predicted Functional Partners:
EDV05288.1
COG: COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain; Psort location: Cytoplasmic, score: 8.96.
 
     0.888
EDV05286.1
ROK family protein; KEGG: bce:BC4260 5.4e-37 glucokinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.794
EDV07167.1
TonB-linked outer membrane protein, SusC/RagA family; COG: NOG26721 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
   
 0.692
EDV07168.1
SusD family protein.
  
     0.668
EDV07164.1
TonB-linked outer membrane protein, SusC/RagA family; COG: NOG26415 non supervised orthologous group.
  
  
 0.661
EDV07163.1
SusD family protein; COG: NOG25802 non supervised orthologous group.
  
     0.650
EDV05289.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: bth:BT4193 0. dipeptidyl peptidase IV K01278; COG: COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
       0.626
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.626
EDV05291.1
Hypothetical protein; COG: NOG19148 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
EDV03036.1
Transporter, major facilitator family protein; KEGG: bps:BPSS1635 1.1e-25 probable class III aminotransferase K00836; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.444
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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