STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05305.1Hypothetical protein; KEGG: ana:alr1077 0.0015 probable carboxymethylenebutenolidase K01061; COG: COG1073 Hydrolases of the alpha/beta superfamily. (384 aa)    
Predicted Functional Partners:
EDV03379.1
Hypothetical protein; KEGG: bur:Bcep18194_C7221 0.0065 poly(3-hydroxybutyrate) depolymerase-like; COG: COG1073 Hydrolases of the alpha/beta superfamily.
  
     0.691
EDV05304.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ava:Ava_2239 9.4e-56 adenylate/guanylate cyclase K01768; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.609
EDV04762.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.566
EDV05661.1
Fibrobacter succinogene major paralogous domain protein; COG: NOG09703 non supervised orthologous group.
 
     0.551
EDV06314.1
Glycosyltransferase, group 1 family protein.
  
     0.503
EDV05307.1
KEGG: tma:TM0077 3.9e-27 acetylxylan esterase K01060; COG: COG3458 Acetyl esterase (deacetylase).
 
     0.498
EDV04216.1
Efflux ABC transporter, permease protein; COG: NOG27375 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
 
   
 0.497
EDV04658.1
TonB family domain protein; COG: NOG19138 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.486
EDV07077.1
Hypothetical protein; COG: NOG18027 non supervised orthologous group.
  
     0.468
EDV05609.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: tma:TM1193 2.6e-13 beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase.
  
     0.461
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.