STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05318.1Bacteriophage CI repressor protein; KEGG: cyb:CYB_2330 0.00029 peptidase, S24 (LexA) family. (250 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.735
EDV05915.1
DnaD domain protein; COG: NOG19076 non supervised orthologous group.
 
     0.724
EDV05317.1
GSCFA family protein; COG: NOG09953 non supervised orthologous group.
       0.720
EDV06721.1
Hypothetical protein; COG: COG2755 Lysophospholipase L1 and related esterases.
  
     0.577
EDV04843.1
Hypothetical protein.
  
     0.576
EDV03684.1
Putative glycosyl hydrolase family 10.
  
     0.571
EDV03285.1
Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.570
EDV05319.1
Hypothetical protein.
       0.551
EDV05412.1
Hypothetical protein.
  
     0.534
EDV05891.1
Hypothetical protein; COG: NOG24980 non supervised orthologous group.
  
     0.516
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.