STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05339.1Hypothetical protein; COG: COG3950 Predicted ATP-binding protein involved in virulence; Psort location: Cytoplasmic, score: 8.96. (333 aa)    
Predicted Functional Partners:
EDV05340.1
Hypothetical protein; KEGG: pmu:PM1147 2.5e-07 iron chelatin ABC transporter, putative K02013; COG: COG3950 Predicted ATP-binding protein involved in virulence.
 
     0.924
EDV05338.1
COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.786
EDV04977.1
Hypothetical protein; KEGG: chu:CHU_3268 2.1e-34 peptidyl-prolyl cis-trans isomerase K01802; COG: NOG26630 non supervised orthologous group.
  
     0.760
EDV03754.1
Hypothetical protein; COG: NOG27017 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.744
EDV06324.1
Hypothetical protein; COG: NOG29149 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.729
EDV03123.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:pli0050 1.6e-09 similar to the two components sensor protein kdpD K07646; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.725
EDV05904.1
PAP2 family protein; COG: NOG08816 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.720
EDV04713.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.704
EDV05682.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.691
EDV07708.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.