STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05341.1Putative membrane protein; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 10.00. (303 aa)    
Predicted Functional Partners:
EDV05340.1
Hypothetical protein; KEGG: pmu:PM1147 2.5e-07 iron chelatin ABC transporter, putative K02013; COG: COG3950 Predicted ATP-binding protein involved in virulence.
       0.717
EDV05339.1
Hypothetical protein; COG: COG3950 Predicted ATP-binding protein involved in virulence; Psort location: Cytoplasmic, score: 8.96.
       0.610
EDV04136.1
Hypothetical protein; COG: NOG27388 non supervised orthologous group; Belongs to the 'phage' integrase family.
  
     0.568
EDV06064.1
Putative membrane protein; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.503
EDV05338.1
COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.438
EDV05130.1
Hypothetical protein; COG: NOG18433 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.427
EDV05348.1
Site-specific recombinase, phage integrase family; COG: NOG27388 non supervised orthologous group; Belongs to the 'phage' integrase family.
  
     0.419
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.