STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05354.1DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. (96 aa)    
Predicted Functional Partners:
EDV05353.1
Toxin-antitoxin system, toxin component, RelE family; COG: NOG19159 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.964
EDV03812.1
Toxin-antitoxin system, toxin component, RelE family; COG: NOG19159 non supervised orthologous group.
 
   
 0.791
EDV03813.1
Toxin-antitoxin system, antitoxin component, Xre family; KEGG: mmo:MMOB3450 0.00018 dam; adenine-specific DNA methyltransferase K06223; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.771
EDV05352.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.568
EDV05585.1
COG: COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
  
 
 0.503
EDV07391.1
Zeta toxin; COG: NOG16497 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.492
EDV05355.1
Site-specific recombinase, phage integrase family; COG: NOG27388 non supervised orthologous group; Belongs to the 'phage' integrase family.
  
  
 0.453
EDV05406.1
Glycosyltransferase, group 2 family protein; KEGG: azo:azo3917 5.7e-26 glycosyltransferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: CytoplasmicMembrane, score: 9.46.
  
   
 0.404
EDV05351.1
Hypothetical protein.
       0.400
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.