STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05387.1Transglycosylase SLT domain protein; KEGG: bfs:BF0693 7.1e-186 putative lytic murein transglycosylase K08307; COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (435 aa)    
Predicted Functional Partners:
EDV05386.1
Hypothetical protein; COG: NOG14467 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
  
    0.793
EDV05385.1
ParB-like protein; KEGG: pub:SAR11_0354 1.9e-41 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.96; Belongs to the ParB family.
  
  
 0.792
EDV05388.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
    0.792
EDV05384.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 4.4e-74 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.96.
     
 0.764
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
   
 0.713
lepB
KEGG: bth:BT3319 1.4e-39 signal peptidase I K03100; COG: COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.665
lepB-5
KEGG: bth:BT3319 2.0e-38 signal peptidase I K03100; COG: COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.615
LepB
Hypothetical protein; KEGG: bth:BT0667 4.4e-58 signal peptidase I (SPase I) K03100; COG: COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.597
lepB-3
Signal peptidase I; KEGG: bfs:BF0145 8.2e-121 putative exported signal peptidase I K03100; COG: COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.590
lepB-2
Signal peptidase I; KEGG: bfs:BF0146 3.7e-37 possible signal peptidase K03100; COG: COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.584
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.