STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05436.1TrkA C-terminal domain protein; COG: COG2985 Predicted permease; Psort location: CytoplasmicMembrane, score: 10.00. (531 aa)    
Predicted Functional Partners:
EDV05435.1
WD40-like protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
       0.568
EDV05437.1
FMN-binding domain protein; KEGG: mth:MTH120 1.8e-45 putative NADH-dehydrogenase / MAD(P)H nitroreductase; COG: COG0778 Nitroreductase.
       0.548
EDV02912.1
KEGG: bth:BT0767 6.2e-116 putative para-aminobenzoate synthase component I K01665; COG: COG0147 Anthranilate/para-aminobenzoate synthases component I; Psort location: Cytoplasmic, score: 8.96.
       0.429
EDV02913.1
Hypothetical protein; KEGG: bth:BT0768 1.2e-48 putative para-aminobenzoate synthase component I K02619; COG: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Psort location: Cytoplasmic, score: 8.96.
       0.429
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.