STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05438.1Hypothetical protein; COG: NOG18174 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46. (129 aa)    
Predicted Functional Partners:
EDV05439.1
Glycosyl hydrolase, family 43; KEGG: sde:Sde_0822 5.8e-14 alpha-L-arabinofuranosidase K01209; COG: COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
    0.709
EDV04328.1
Hypothetical protein; KEGG: bcz:BCZK0531 1.5e-96 galE; NAD-dependent epimerase; possible UDP-glucose 4-epimerase K01784; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.96.
       0.429
kbl
2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
       0.429
EDV04327.1
Hypothetical protein; COG: NOG26608 non supervised orthologous group.
       0.424
EDV05440.1
Cupin domain protein; KEGG: azo:azo0951 0.00021 conserved hypothetical phosphomannose protein K01809; COG: COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.404
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.