Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EDV05553.1RteC protein; Psort location: Cytoplasmic, score: 8.96. (206 aa)    
Predicted Functional Partners:
EDV05594.1
RteC protein; COG: NOG28342 non supervised orthologous group.
  
     0.671
EDV02971.1
RteC protein; COG: NOG28342 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
     0.595
EDV07252.1
Hypothetical protein; COG: NOG19108 non supervised orthologous group.
  
     0.554
EDV05554.1
Transcriptional regulator, AraC family; COG: NOG34817 non supervised orthologous group.
       0.543
EDV07254.1
Hypothetical protein; KEGG: ddi:DDB0167703 0.00065 hypothetical protein K01971; COG: NOG09947 non supervised orthologous group.
 
     0.537
EDV04624.1
RteC protein; COG: NOG28342 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.524
EDV06439.1
SusD family protein; COG: NOG26547 non supervised orthologous group.
  
     0.506
traM-2
Conjugative transposon TraM protein; COG: NOG09945 non supervised orthologous group.
 
     0.484
EDV03100.1
Hypothetical protein; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
     0.474
EDV04276.1
Hypothetical protein; COG: NOG09947 non supervised orthologous group.
 
     0.473
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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