STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05568.1KEGG: bur:Bcep18194_C7173 0.0061 two component transcriptional regulator, AraC family; COG: NOG19107 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96. (259 aa)    
Predicted Functional Partners:
EDV03479.1
Hypothetical protein; COG: NOG24782 non supervised orthologous group.
  
     0.517
EDV03104.1
Hypothetical protein; COG: NOG25714 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.508
EDV04629.1
Toprim domain protein; KEGG: fth:FTH_1028 0.0056 dnaG; DNA primase; COG: NOG24782 non supervised orthologous group.
  
     0.508
EDV04580.1
Hypothetical protein; KEGG: lpn:lpg2360 0.0017 DNA primase DnaG K02316; COG: NOG24782 non supervised orthologous group.
  
     0.505
EDV05195.1
Hypothetical protein; COG: NOG29903 non supervised orthologous group.
 
     0.490
EDV05566.1
Hypothetical protein; COG: NOG24980 non supervised orthologous group.
 
     0.479
EDV06230.1
Hypothetical protein; COG: COG4299 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.474
EDV04593.1
Hypothetical protein; KEGG: fal:FRAAL2247 0.0012 chromosome partitioning protein (partial match) K08253; COG: NOG26689 non supervised orthologous group.
  
  
 0.467
EDV04591.1
Hypothetical protein; COG: NOG14430 non supervised orthologous group.
  
     0.463
EDV04644.1
Hypothetical protein; COG: NOG19080 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.462
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.