STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_00255Putative TRAP transporter, DctQ-like membrane protein. (178 aa)    
Predicted Functional Partners:
EL18_00256
TRAP-T family transporter, DctM (12 TMs) subunit.
 
  0.962
EL18_00254
TRAP dicarboxylate transporter subunit DctP.
 
    0.893
yicI
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
     0.863
uxaC_1
Uronate isomerase.
 
    0.829
EL18_00258
D-mannonate oxidoreductase; Belongs to the mannitol dehydrogenase family.
 
     0.779
EL18_00408
C4-dicarboxylate ABC transporter.
  
    0.776
EL18_00410
TRAP-T family transporter, DctM (12 TMs) subunit.
  
  0.769
EL18_03371
TRAP dicarboxylate transporter subunit DctP.
  
    0.717
EL18_03348
TRAP-T family transporter, DctM (12 TMs) subunit.
  
  0.709
EL18_03373
DctM-like transporter protein.
  
  0.708
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.