STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_01515General L-amino acid-binding protein precursor. (376 aa)    
Predicted Functional Partners:
EL18_01513
General L-amino acid ABC transporter membrane protein.
 
  0.996
EL18_01512
General L-amino acid transport ATP-binding subunit.
 
  0.995
EL18_01514
General L-amino acid ABC transporter membrane protein.
 
 
 0.995
EL18_02225
Periplasmic sensor hybrid histidine kinase.
  
 0.859
EL18_00611
Hypothetical protein.
    
 0.763
EL18_00345
Chemotaxis protein CheY.
   
 0.735
EL18_01094
Cell cycle control histidine kinase CckA.
   
 0.735
EL18_02406
Hybrid sensory histidine kinase.
   
 0.735
EL18_02822
Two-component sensor histidine kinase.
   
 0.735
EL18_03006
Hybrid sensory histidine kinase.
   
 0.735
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.