STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_02428Putative transcriptional regulator. (132 aa)    
Predicted Functional Partners:
EL18_02427
Activator of Hsp90 ATPase 1 family protein.
 
    0.912
EL18_00463
DGPFAETKE domain-containing protein.
  
     0.593
EL18_03268
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein.
  
     0.574
EL18_00596
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family.
  
     0.547
EL18_02429
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
       0.515
EL18_02430
Hypothetical protein.
       0.515
EL18_00588
3-demethylubiquinone-9 3-methyltransferase.
 
    0.492
EL18_00285
Heavy metal translocating P-type ATPase.
  
  
 0.479
EL18_02940
Transcriptional regulator(Repressor protein).
  
     0.418
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.