STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_02476ATP-utilizing enzymes of the PP-loop superfamily protein. (260 aa)    
Predicted Functional Partners:
EL18_02475
Phosphoribosylaminoimidazole carboxylase, catalytic subunit.
 
  
 0.990
EL18_02478
Hypothetical protein.
 
  
 0.987
EL18_02477
Hypothetical protein.
 
  
 0.982
EL18_02479
Fumarylacetoacetate (FAA) hydrolase; Overlaps another CDS with the same product name.
       0.693
EL18_02480
Fumarylacetoacetate (FAA) hydrolase; Overlaps another CDS with the same product name.
       0.693
EL18_02481
Oxidoreductase.
       0.620
EL18_00344
Ribulose bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
    
  0.580
EL18_02474
Hypothetical protein.
       0.497
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
   
    0.469
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.