STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_02504Transmembrane protein. (496 aa)    
Predicted Functional Partners:
EL18_02506
Putative Exported protein.
    0.927
EL18_00356
Putative Exported protein.
 
    0.827
EL18_00361
Hypothetical protein.
  
    0.824
EL18_03434
Hypothetical protein.
  
    0.822
EL18_02204
Hypothetical protein.
  
    0.820
EL18_00236
Putative Exported protein.
 
    0.819
EL18_03403
Putative Exported protein.
  
    0.818
EL18_01923
Hypothetical protein.
  
    0.811
EL18_00301
Putative tricarboxylic transport membrane protein.
  
    0.805
EL18_03451
Hypothetical protein.
  
    0.795
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.