STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03271ABC transporter periplasmic solute-binding protein. (431 aa)    
Predicted Functional Partners:
EL18_03272
Urea ABC transporter permease UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.998
EL18_03274
Urea ABC transporter ATPase protein UrtD.
 
  
 0.995
EL18_03273
Urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
EL18_03275
Urea ABC transporter ATPase protein UrtE.
 
 
  0.994
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.736
EL18_01918
Two-component response regulator.
 
   0.734
EL18_03270
Two-component hybrid sensor and regulator.
 
 
  0.732
ureE
Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
     0.723
EL18_03269
Two-component response regulator.
 
  
  0.705
EL18_03410
High-affinity branched-chain amino acid transport system permease protein LivH (LIV-I protein H); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.688
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.