STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03428ABC-type proline/glycine betaine transport system, permease component precursor. (389 aa)    
Predicted Functional Partners:
EL18_03429
ABC transporter, periplasmic substrate-binding protein.
 
 0.999
EL18_03427
ATP-binding protein.
 
 0.996
EL18_03426
ABC transporter.
 
  
 
0.932
EL18_00452
Glycine betaine/L-proline ABC transporter ATPase.
 
  
 0.635
EL18_00454
Choline ABC transporter periplasmic binding protein.
 
 
 0.481
EL18_00453
Glycine/betaine/proline ABC transporter membrane protein.
 
 
 
0.477
EL18_03432
Arsenical resistance protein ArsH.
  
    0.469
EL18_03430
Major facilitator superfamily protein.
       0.462
EL18_03431
Regulatory protein ArsR.
       0.462
EL18_01964
Membrane protein.
    
  0.424
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.