STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03435Tripartite tricarboxylate transporter TctB family protein. (174 aa)    
Predicted Functional Partners:
EL18_03436
Hypothetical protein.
       0.752
EL18_03433
Hypothetical protein.
       0.732
EL18_03434
Hypothetical protein.
       0.732
EL18_03437
Mandelate racemase/muconate lactonizing protein.
       0.691
pdxA_2
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.686
EL18_03438
Dihydrodipicolinate synthetase precursor; Belongs to the DapA family.
       0.682
EL18_03439
Transcriptional regulator, GntR family protein.
       0.682
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.