STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03464Class II aldolase/adducin family protein. (263 aa)    
Predicted Functional Partners:
EL18_03465
ABC transporter substrate binding protein.
 
     0.769
EL18_01272
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
   
    0.726
EL18_02786
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
   
    0.726
EL18_00344
Ribulose bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
  
 
 0.631
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  
 0.575
xylB
Xylulokinase.
  
 
 0.566
EL18_00019
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase.
  
  
 
0.565
EL18_03329
FGGY-family pentulose kinase.
  
 
 0.560
EL18_03469
Acetylornithine deacetylase.
 
  
  0.475
EL18_02820
Putative Class II aldolase.
  
  
  0.473
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.