STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03465ABC transporter substrate binding protein. (515 aa)    
Predicted Functional Partners:
EL18_03467
Dipeptide ABC transporter.
  0.937
EL18_03466
Oligopeptide ABC transporter.
  0.915
EL18_03464
Class II aldolase/adducin family protein.
 
     0.769
EL18_03468
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
  0.656
EL18_03299
ABC transporter permease.
 
  0.633
EL18_00819
Binding-protein-dependent transport systems inner membrane component.
 
  0.629
EL18_00820
Binding-protein-dependent transport system inner membrane protein.
 
  0.598
EL18_03298
ABC transporter permease.
 
  0.593
EL18_02584
Binding-protein-dependent transport systems inner membrane component precursor; Overlaps another CDS with the same product name.
 
  0.548
EL18_03315
Binding-protein-dependent transport systems inner membrane component precursor; Overlaps another CDS with the same product name.
 
  0.548
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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