STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03470D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. (319 aa)    
Predicted Functional Partners:
EL18_03471
Histone deacetylase family protein.
 
 
  0.893
EL18_03469
Acetylornithine deacetylase.
 
  
  0.831
EL18_03108
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 0.823
EL18_03472
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.744
EL18_01124
Malic enzyme, NAD-binding protein.
  
 
  0.683
EL18_02459
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase.
  
 
  0.683
EL18_03474
Putative translation initiation inhibitor, yjgF family.
 
     0.611
EL18_03473
Glycine/D-amino acid oxidase, deaminating precursor.
    
  0.585
EL18_02368
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
 
  
 
0.552
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.551
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.