STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03484Siderophore-interacting protein. (358 aa)    
Predicted Functional Partners:
EL18_02052
Type I secretion system ATPase.
   
  0.940
EL18_03398
Type I secretion system ATPase.
   
  0.940
EL18_03486
TonB-dependent siderophore receptor precursor.
 
  
 0.885
EL18_03485
Major facilitator superfamily MFS_1 precursor.
 
    0.824
EL18_00460
Anthranilate synthase.
  
    0.534
EL18_03487
LacI family transcription regulator.
       0.475
EL18_03488
Extracellular solute-binding protein.
 
     0.455
EL18_00152
Aminodeoxychorismate synthase.
  
    0.450
EL18_01698
Hypothetical protein.
  
     0.446
EL18_02328
Periplasmic-binding protein.
 
  
 0.404
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.