STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03485Major facilitator superfamily MFS_1 precursor. (404 aa)    
Predicted Functional Partners:
EL18_03486
TonB-dependent siderophore receptor precursor.
 
     0.916
EL18_03484
Siderophore-interacting protein.
 
    0.824
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.666
EL18_00460
Anthranilate synthase.
    
  0.665
EL18_01113
Phospholipase D/Transphosphatidylase.
  
  
  0.653
EL18_01594
AMP-dependent synthetase and ligase.
  
 
 0.581
EL18_03488
Extracellular solute-binding protein.
 
     0.563
EL18_03487
LacI family transcription regulator.
       0.475
EL18_03490
ABC transporter permease.
 
     0.466
EL18_00137
Glutamate synthase (NADH) large subunit.
      
 0.402
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.