Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EL18_03485Major facilitator superfamily MFS_1 precursor. (404 aa)    
Predicted Functional Partners:
EL18_03486
TonB-dependent siderophore receptor precursor.
 
     0.925
EL18_03484
Siderophore-interacting protein.
 
    0.821
EL18_03488
Extracellular solute-binding protein.
 
     0.562
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.477
EL18_03487
LacI family transcription regulator.
       0.475
EL18_01113
Phospholipase D/Transphosphatidylase.
  
  
  0.474
EL18_00899
Glycoside hydrolase.
 
   
 0.468
EL18_03490
ABC transporter permease.
 
     0.466
EL18_00460
Anthranilate synthase.
    
  0.450
EL18_00353
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.411
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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