STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL18_03490ABC transporter permease. (259 aa)    
Predicted Functional Partners:
EL18_03489
Binding-protein-dependent transport systems inner membrane component.
 
 0.992
EL18_03488
Extracellular solute-binding protein.
 
 
 0.971
EL18_02151
Binding-protein-dependent transport systems inner membrane component.
 
 0.955
EL18_02216
Spermidine/putrescine transport system, permease.
 
 0.942
EL18_02215
Putative Spermidine/putrescine-binding periplasmic protein.
 
 
 0.900
EL18_03245
ABC transporter-like protein.
 
 
 0.895
EL18_02153
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.883
EL18_02218
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.861
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.826
EL18_00902
ABC transporter related protein; Belongs to the ABC transporter superfamily.
  
 
 0.612
Your Current Organism:
Nitratireductor basaltis
NCBI taxonomy Id: 472175
Other names: JCM 14935, KCTC 22119, N. basaltis, Nitratireductor basaltis Kim et al. 2009, Nitratireductor sp. AZNO2, strain J3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.