STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS79071.1Urea transport system substrate-binding protein. (409 aa)    
Predicted Functional Partners:
SDS79140.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
SDS79164.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
SDS79246.1
Urea transport system ATP-binding protein.
 
 
 0.993
SDS79210.1
Urea transport system ATP-binding protein.
 
  
 0.992
SDS85448.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
SDS34789.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.925
SDS34781.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.921
SDS34868.1
Urea transport system ATP-binding protein.
 
 
 0.880
SDS34822.1
Urea transport system ATP-binding protein.
 
  
 0.847
SDS85486.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.752
Your Current Organism:
Pseudomonas sabulinigri
NCBI taxonomy Id: 472181
Other names: JCM 14963, KCTC 22137, P. sabulinigri, Pseudomonas sabulinigri Kim et al. 2009, Pseudomonas sp. J64, strain J64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.