Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_3128 | LO55_616 | LO55_3128 | LO55_616 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | ygfH_subfam: succinate CoA transferase family protein. | 0.555 |
| LO55_3128 | frc | LO55_3128 | LO55_11 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.478 |
| LO55_3128 | icmF | LO55_3128 | LO55_1309 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Hypothetical protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.837 |
| LO55_3128 | oxc | LO55_3128 | LO55_5178 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Oxalate_oxc: oxalyl-CoA decarboxylase; Belongs to the TPP enzyme family. | 0.571 |
| LO55_3128 | paaN | LO55_3128 | LO55_2019 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | paaN-DH: phenylacetic acid degradation protein paaN. | 0.936 |
| LO55_3128 | sucC | LO55_3128 | LO55_1883 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.841 |
| LO55_3128 | sucD | LO55_3128 | LO55_1884 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.869 |
| LO55_4632 | LO55_4635 | LO55_4632 | LO55_4635 | mmgE/PrpD family protein. | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | 0.977 |
| LO55_4632 | LO55_616 | LO55_4632 | LO55_616 | mmgE/PrpD family protein. | ygfH_subfam: succinate CoA transferase family protein. | 0.430 |
| LO55_4632 | frc | LO55_4632 | LO55_11 | mmgE/PrpD family protein. | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.410 |
| LO55_4632 | icmF | LO55_4632 | LO55_1309 | mmgE/PrpD family protein. | Hypothetical protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.445 |
| LO55_4632 | paaN | LO55_4632 | LO55_2019 | mmgE/PrpD family protein. | paaN-DH: phenylacetic acid degradation protein paaN. | 0.421 |
| LO55_4632 | sucC | LO55_4632 | LO55_1883 | mmgE/PrpD family protein. | succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.617 |
| LO55_4632 | sucD | LO55_4632 | LO55_1884 | mmgE/PrpD family protein. | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.619 |
| LO55_4635 | LO55_4632 | LO55_4635 | LO55_4632 | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | mmgE/PrpD family protein. | 0.977 |
| LO55_4635 | frc | LO55_4635 | LO55_11 | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | formyl-CoA transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. | 0.424 |
| LO55_4635 | paaN | LO55_4635 | LO55_2019 | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | paaN-DH: phenylacetic acid degradation protein paaN. | 0.444 |
| LO55_4635 | sucC | LO55_4635 | LO55_1883 | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.608 |
| LO55_4635 | sucD | LO55_4635 | LO55_1884 | Hypothetical protein; N-terminal half of MaoC dehydratase family protein. | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.609 |
| LO55_616 | LO55_3128 | LO55_616 | LO55_3128 | ygfH_subfam: succinate CoA transferase family protein. | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | 0.555 |
page 1 of 4