STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exoPExo-1,3/1,4-beta-glucanase; Belongs to the glycosyl hydrolase 3 family. (840 aa)    
Predicted Functional Partners:
LO55_874
Beta-lactamase family protein.
 
 
 0.886
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
 
  
 0.842
LO55_1286
BGL: beta-galactosidase.
    
 0.836
lamA
Endo-beta-1,3-glucanase.
 
 0.768
LO55_1156
Glycosyltransferase 36 associated family protein.
    
 0.763
LO55_2631
Beta-glucan synthesis-associated family protein.
 
 
 0.757
LO55_3573
Glycosyl hydrolases 31 family protein; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.737
LO55_3036
Hypothetical protein; Glycosyl-hydrolase 97 N-terminal family protein.
  
  
 0.734
gluP
gluP: glucose/galactose transporter WARNING family protein.
 
     0.706
LO55_1285
Transcriptional regulator, LacI family.
 
  
  0.701
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.