Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LO55_1355 | LO55_1356 | LO55_1355 | LO55_1356 | Peptidase M13 family protein. | Peptidase M13 family protein. | 0.575 |
LO55_1355 | LO55_1398 | LO55_1355 | LO55_1398 | Peptidase M13 family protein. | Hypothetical protein; creatinase/Prolidase N-terminal domain protein. | 0.446 |
LO55_1355 | LO55_159 | LO55_1355 | LO55_159 | Peptidase M13 family protein. | Metallopeptidase M24 family protein. | 0.446 |
LO55_1355 | LO55_1788 | LO55_1355 | LO55_1788 | Peptidase M13 family protein. | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.576 |
LO55_1355 | LO55_1800 | LO55_1355 | LO55_1800 | Peptidase M13 family protein. | Hypothetical protein; Aminopeptidase P, N-terminal domain protein; Belongs to the peptidase M24B family. | 0.446 |
LO55_1355 | LO55_2332 | LO55_1355 | LO55_2332 | Peptidase M13 family protein. | NHL repeat family protein. | 0.451 |
LO55_1355 | LO55_4783 | LO55_1355 | LO55_4783 | Peptidase M13 family protein. | PA domain protein. | 0.492 |
LO55_1355 | gap | LO55_1355 | LO55_322 | Peptidase M13 family protein. | GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.416 |
LO55_1355 | polA | LO55_1355 | LO55_597 | Peptidase M13 family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.576 |
LO55_1355 | ruvB | LO55_1355 | LO55_648 | Peptidase M13 family protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.624 |
LO55_1356 | LO55_1355 | LO55_1356 | LO55_1355 | Peptidase M13 family protein. | Peptidase M13 family protein. | 0.575 |
LO55_1356 | LO55_1398 | LO55_1356 | LO55_1398 | Peptidase M13 family protein. | Hypothetical protein; creatinase/Prolidase N-terminal domain protein. | 0.446 |
LO55_1356 | LO55_159 | LO55_1356 | LO55_159 | Peptidase M13 family protein. | Metallopeptidase M24 family protein. | 0.446 |
LO55_1356 | LO55_1788 | LO55_1356 | LO55_1788 | Peptidase M13 family protein. | Hypothetical protein; 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.576 |
LO55_1356 | LO55_1800 | LO55_1356 | LO55_1800 | Peptidase M13 family protein. | Hypothetical protein; Aminopeptidase P, N-terminal domain protein; Belongs to the peptidase M24B family. | 0.446 |
LO55_1356 | LO55_2332 | LO55_1356 | LO55_2332 | Peptidase M13 family protein. | NHL repeat family protein. | 0.450 |
LO55_1356 | LO55_4783 | LO55_1356 | LO55_4783 | Peptidase M13 family protein. | PA domain protein. | 0.492 |
LO55_1356 | gap | LO55_1356 | LO55_322 | Peptidase M13 family protein. | GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.416 |
LO55_1356 | polA | LO55_1356 | LO55_597 | Peptidase M13 family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.576 |
LO55_1356 | ruvB | LO55_1356 | LO55_648 | Peptidase M13 family protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.624 |
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