STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galTgalT_1: galactose-1-phosphate uridylyltransferase. (364 aa)    
Predicted Functional Partners:
galK
Gal_kin: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.999
galK-2
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.996
galE
galE: UDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.983
LO55_159
Metallopeptidase M24 family protein.
 
     0.915
LO55_157
Glycosyl hydrolases family 2, TIM barrel domain protein; Belongs to the glycosyl hydrolase 2 family.
 
     0.896
rfbB
dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
 
 0.881
LO55_190
Aldose 1-epimerase family protein; Converts alpha-aldose to the beta-anomer.
 
 0.821
LO55_3942
Glycosyl transferases group 1 family protein.
 
  
 0.800
LO55_3815
Aldose 1-epimerase family protein.
  
 0.789
galU
galU: UTP--glucose-1-phosphate uridylyltransferase.
     
 0.683
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.