Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LO55_190Aldose 1-epimerase family protein; Converts alpha-aldose to the beta-anomer. (351 aa)    
Predicted Functional Partners:
galK-2
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.990
galK
Gal_kin: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.988
galE
galE: UDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.922
glk-5
Glk: glucokinase; Belongs to the bacterial glucokinase family.
    
 0.871
LO55_942
Beta-galactosidase family protein.
    
 0.863
LO55_3815
Aldose 1-epimerase family protein.
     
  0.850
galT-2
galT_1: galactose-1-phosphate uridylyltransferase.
 
 0.812
galT
galT_1: galactose-1-phosphate uridylyltransferase.
 
 0.796
LO55_3646
Glycosyl hydrolases 2 family protein; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.795
LO55_189
SMP-30/Gluconolaconase/LRE-like region family protein.
     
 0.794
Your Current Organism:
Massilia timonae
NCBI taxonomy Id: 47229
Other names: CCUG 45783, CIP 105350, Janthinobacterium sp. R2-11, M. timonae, Massilia timonae La Scola et al. 2000 emend. Lindquist et al. 2003, Timone isolate, strain UR/MT95
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